Hernández-Zulueta J, Díaz-Pérez L, García-Maldonado JQ, Nava-Martínez GG, García-Salgado MA, Rodríguez-Zaragoza FA. 2022. Bacterial assemblages associated with Acropora palmata affected by white band disease in the Mexican region of the Caribbean and Gulf of Mexico. Journal of Sea Research 185, 102230.

Carabantes N, Cerqueda-García D, García-Maldonado JQ, Thomé PE. 2022. Changes in the bacterial community associated with experimental symbiont loss in the mucus layer of Cassiopea xamachana jellyfish. Frontiers in Marine Science 9, 1110 (2022).

Suárez-Moo P, Remes-Rodríguez CA, Márquez-Velázquez NA, Falcón LI, García-Maldonado JQ, Prieto-Davó A. 2022. Changes in the sediment microbial community structure of coastal and inland sinkholes of a karst ecosystem from the Yucatan peninsula. Sci Rep 12, 1110 (2022).


Wong-Villarreal A, Méndez-Santiago EW, Gómez-Rodríguez O, Aguilar-Marcelino L, Cerqueda-García D, García-Maldonado JQ, Hernández-Velázquez VM, Yañez-Ocampo G, Espinosa-Zaragoza S, Ramírez-González SI, Sanzón-Gómez D. 2021. Nematicidal Activity of the Endophyte Serratia ureilytica against Nacobbus aberrans in Chili Plants (Capsicum annuum L.) and Identification of Genes Related to Biological Control. Plants. 10(12):2655.

Ávila-LópezMB, García-Maldonado JQ, Estrada-Medina H, Hernández-Mena DI, Cerqueda-García D, Vidal-Martínez VM. 2021. First record of entomopathogenic nematodes from Yucatán State, Mexico and their infectivity capacity against Aedes aegypti. PeerJ 9:e11633.

García-Bautista I, García-Cruz U, Pacheco N, García-Maldonado JQ, Aguirre-Macedo ML. 2021. Optimization of the Biodegradation of Aliphatic, Aromatic, and UCM Hydrocarbons from Light Crude Oil in Marine Sediment Using Response Surface Methodology (RSM). Bulletin of Environmental Contamination and Toxicology.

Uribe-Flores MM, García-Cruz U, Hernández-Nuñez E, Cerqueda-García D, Aguirre-Macedo ML, García-Maldonado JQ. 2021. Assessing the effect of chemical dispersant Nokomis 3-F4 on the microbial degradation of a heavy crude oil by a marine microbial consortium. Bulletin of Environmental Contamination and Toxicology.

Thome PE, Rivera-Ortega J, Rodríguez-Villalobos JC, Cerqueda-García D, Guzmán-Urieta EO, García-Maldonado JQ, Jordán-Dahlgren E. 2021. Local dynamics of a white syndrome outbreak and changes in the microbial community associated with colonies of the sclreactinian brain coral Pseudodiploria strigosa. PeerJ. 9:e10695.


Sánchez-Soto MF, Cerqueda-García D, Alcántara-Hernández RJ, Falcón LI, Pech D, Árcega-Cabrera F, Aguirre-Macedo ML, García-Maldonado JQ. 2021. Assessing the diversity of benthic sulfate-reducing microorganisms in Northwestern Gulf of Mexico by Illumina sequencing of dsrB gene. Microbial Ecology. 81:908-921

Abdul Malik SA, Bazire A, Gamboa-Muñoz A, Bedoux G, Robledo D, García-Maldonado JQ, Bourgougnon N. 2020. Screening of Surface-Associated Bacteria from the Mexican Red Alga Halymenia floresii for Quorum Sensing Activity. Microbiology. 89(6) 778-788.

Meneses-Lazo R, Garruña R, Echevarría-Machadi I, Alvarado-López C, Villanueva-Couoh E, García-Maldonado JQ, Cristóbal-Alejo J. 2020. Growth, chlorophyll fluorescence and gas exchange of pepper (Capsicum chinense Jacq.) plants in response to uptake and partitioning of nutrients. Chilean Journal of Agriculture Research. 80(4), 585-597.

López-Cortés A, Latisnere-Barragán H, García-Maldonado JQ, Martínez MA, Munguía-Vega A. 2020. Intestinal Microbiota Analyses of Litopenaeus vannamei During a Case of Atypical Massive Mortality in Northwestern Mexico. Current Microbiology. 77:2312–2321.

Améndola-Pimenta M, Cerqueda-García D, Zamora-Briseño JA, Couoh-Puga D, Montero-Muñoz J, Árcega-Cabrera F, Ceja-Moreno V, Pérez-Vega JA, García-Maldonado JQ, del Río-García M, Zapata-Pérez O, Rodríguez-Canul R. 2020. Toxicity evaluation and microbiota response of the lined sole Achirus lineatus (Chordata: Achiridae) exposed to the light petroleum water-accommodated fraction (WAF). Journal of Toxicology and Environmental Health, Part A. 83(8):313-329.

Shareen A, Malik A, Bedoux G, Robledo D, García-Maldonado JQ, Freile-Pelegrín Y, Bourgougnon N. 2020. Chemical defense against microfouling by allelopathic active metabolites of Halymenia floresii (Rhodophyta). Journal of Applied Phycology. 32:2673-2687.

Shareen A, Malik A, Bedoux G, García-Maldonado JQ, Freile-Pelegrín Y, Robledo D, Bourgougnon N. 2020. Defence on surface: macroalgae and their surface-associated microbiome. In: Advances in Botanical Research, Academic Press. ​ ​

​Cerqueda-García D, García-Maldonado JQ, Aguirre-Macedo ML, García-Cruz U. 2020. A succession of marine bacterial communities in batch reactor experiments during the degradation of five different petroleum types. Marine Pollution Bulletin. 150:110775.​


​Cadena S, Aguirre-Macedo ML, Cerqueda-García D, Cervantes FJ, Herrera-Silveira JA, García-Maldonado JQ. 2019. Community structure and distribution of benthic Bacteria and Archaea in a stratified coastal lagoon in the Southern Gulf of Mexico. Estuarine, Coastal and Shelf Science. 230:106433. ​ ​

Valencia-Agami SS, Cerqueda-García D, Putzeys S, Uribe-Flores MM, García-Cruz NU, Pech D, Herrera-Silveira J, Aguirre-Macedo ML, García-Maldonado JQ. 2019. Changes in the Bacterioplankton Community Structure from Southern Gulf of Mexico During a Simulated Crude Oil Spill at Mesocosm Scale. Microorganisms. 7, 441.​

Uribe‐Flores MM, Cerqueda‐García D, Hernández‐Nuñez E, Cadena S, García‐Cruz NU, Trejo‐Hernández MR, Aguirre‐Macedo ML, García‐Maldonado JQ. 2019. Bacterial succession and co‐occurrence patterns of an enriched marine microbial community during light crude oil degradation in a batch reactor. Journal of Applied Microbiology. 127:495-507. ​ ​

García-Cruz NU, Valdivia-Rivera S, Narciso-Ortiz L, García-Maldonado JQ, Uribe-Flores MM, Aguirre-Macedo ML, Lizardi-Jiménez MA. 2019. Diesel uptake by an indigenous microbial consortium isolated from sediments of the Southern Gulf of Mexico: Emulsion characterization. Environmental Pollution. 250:849-855. ​ ​

Hernández-Núñez E, Martínez-Gutiérrez CA, López-Cortés A, Aguirre‐Macedo ML, Tabasco‐Novelo C, González‐Díaz MO, García‐Maldonado JQ. 2019. Physico-chemical Characterization of Poly(3-Hydroxybutyrate) Produced by Halomonas salina, Isolated from a Hypersaline Microbial Mat. Journal of Polymers and the Environment. 27(5):1105-1111. ​ ​


García-Maldonado JQ, Escobar-Zepeda A, Raggi L, Bebout BM, Sanchez-Flores A, López- Cortés A. 2018. Bacterial and archaeal profiling of hypersaline microbial mats and endoevaporites, under natural conditions and methanogenic microcosm experiments. Extremophiles. 18(6):903-916.  ​​

​Martínez-Gutiérrez CA, Latisnere-Barragán H, García-Maldonado JQ, López-Cortés A. 2018. Screening of polyhydroxyalkanoate-producing bacteria and PhaC-encoding genes in two hypersaline microbial mats from Guerrero Negro, Baja California Sur, Mexico. PeerJ. 6:e4780. ​​

Sánchez-Soto Jiménez MF, Cerqueda-García D, Montero-Muñoz JL, Aguirre-Macedo ML, García-Maldonado JQ. 2018. Assessment of the bacterial community structure in shallow and deep sediments of the Perdido Fold Belt region in the Gulf of Mexico. PeerJ. 6:e5583.​​

2008 – 2017​

​Cadena S, García-Maldonado JQ, López-Lozano NE, Cervantes FJ. 2017. Methanogenic and Sulfate-Reducing Activities in a Hypersaline Microbial Mat and Associated Microbial Diversity. Microbial Ecology 75(4):930-940.  ​​

García-Maldonado JQ, Bebout BM, Everroad RC, López-Cortés A. 2015. Evidence of novel phylogenetic lineages of methanogenic archaea from hypersaline microbial mats. Microbial Ecology 69(1):106-117. ​ ​

García-Maldonado JQ, Bebout BM, Celis LB, López-Cortés A. 2012. Phylogenetic diversity of methyl-coenzyme M reductase (mcrA) gene and methanogenesis from trimethylamine in hypersaline environments. International Microbiology 15:33-42. ​ 

López-Cortés A, Maya-Delgado Y, García-Maldonado JQ. 2010. Diversidad filogenética de especies de Microcoleus de costras biológicas de suelo de la península de Baja California, México. Revista Mexicana de Biodiversidad. 81:1-7.​ ​

López-Cortés A, Lanz-Landázuri A, García-Maldonado JQ. 2008. Screening and Isolation of PHB-Producing Bacteria in a Polluted Marine Microbial Mat. Microbial Ecology 56(1):112-120. ​